bio-epitranscriptomics-m6a-peak-calling - m6A Peak Calling from MeRIP-seq Data
Identify m6A-modified RNA regions by comparing IP and input MeRIP-seq samples
Tags
Updated: 2026-02-14Capabilities
Typical Inputs
Typical Outputs
What this skill does
- call m6A peaks from MeRIP-seq data
- compare IP vs input samples
- export peak results
Inputs
- BAM files (IP replicates)
- BAM files (input replicates)
- gene annotation GTF
Outputs
- m6A peak BED files
- peak enrichment statistics
- peak calling results
Requirements
- R environment with exomePeak2 package
- MACS3 command-line tool
- MeRIP-seq data in BAM format