brenda-database - Query BRENDA enzyme database data
Access BRENDA through its SOAP API to retrieve enzyme kinetics, reactions, organism data, environmental parameters, and substrate information.
Tags
Updated: 2026-10-16Capabilities
Typical Inputs
Typical Outputs
What this skill does
- Retrieve kinetic parameters
- Retrieve reaction equations
- Search enzymes by substrate
- Search enzymes by product
- Compare organism-specific properties
- Retrieve environmental parameters
- Retrieve cofactor requirements
- Analyze substrate specificity
- Retrieve inhibitor information
- Retrieve activator information
- Find thermophilic homologs
- Find pH-stable variants
- Prepare modeling parameters
- Generate kinetic plots
Inputs
- EC number
- Organism name
- Substrate name
- Product name
- Reaction pattern
- BRENDA credentials
- Temperature threshold
- pH threshold
Outputs
- Kinetic parameter data
- Reaction equations
- Enzyme search results
- Organism comparison data
- Environmental parameter data
- Cofactor requirement data
- Substrate specificity data
- Inhibitor and activator data
- Kinetic plots
Requirements
- Python environment
- BRENDA account
- BRENDA API credentials
- Network access
- Installed Python dependencies