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chembl-database - Query ChEMBL database for molecules, targets, and activities

Query the ChEMBL database for bioactive molecules, drug targets, bioactivity data, approved drugs, and chemical structures.

Tags

Updated: 2026-09-24
chembldatabasebioactivitymoleculestargetsdrug-discovery

Capabilities

Query ChEMBL API endpointsSearch bioactive moleculesFetch drug target detailsFilter bioactivity data

Typical Inputs

ChEMBL IDsMolecule namesTarget names

Typical Outputs

JSON result filesSDF structure filesSVG structure images

What this skill does

  • Query ChEMBL API endpoints
  • Search bioactive molecules
  • Fetch drug target details
  • Filter bioactivity data
  • Perform structure searches
  • Download structure images

Inputs

  • ChEMBL IDs
  • Molecule names
  • Target names
  • SMILES strings
  • Bioactivity filter parameters
  • UniProt accessions

Outputs

  • JSON result files
  • SDF structure files
  • SVG structure images
  • PNG structure images
  • License notification file

Requirements

  • uv
  • scripts/chembl_api.py

Source

  • Spec: SKILL.md

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