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chembl-database - Query ChEMBL bioactive molecules database

Query ChEMBL's bioactive molecules and drug discovery data programmatically

Tags

Updated: 2026-06-30

Capabilities

Typical Inputs

Typical Outputs

What this skill does

  • get molecule by ID
  • search molecule by name
  • filter molecule by properties
  • get target by ID
  • search target by type
  • query bioactivity data
  • get compound activities
  • perform similarity search
  • perform substructure search
  • get drug information
  • get mechanism of action
  • get drug indications

Inputs

  • ChEMBL ID
  • Molecule name
  • Target name
  • Target ID
  • SMILES string
  • Compound properties
  • Bioactivity filters
  • Drug ID

Outputs

  • Molecule data
  • Target information
  • Bioactivity measurements
  • Drug information
  • Mechanism data
  • Search results

Requirements

  • Python environment
  • ChEMBL Python client
  • Internet connection

Source

  • Spec: SKILL.md

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drug discovery
medicinal chemistry
bioactivity data
compound search
molecular database
cheminformatics
get molecule by ID
search molecule by name
filter molecule by properties
get target by ID
ChEMBL ID
Molecule name
Target name
Molecule data
Target information
Bioactivity measurements