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deepchem - Run molecular machine learning with DeepChem

Loads and featurizes molecular data, trains and evaluates traditional ML or neural models, and predicts chemical, biological, and materials properties.

Tags

Updated: 2026-10-03

Capabilities

Typical Inputs

Typical Outputs

What this skill does

  • Load molecular datasets
  • Featurize molecular structures
  • Split molecular datasets
  • Train predictive models
  • Use pretrained models
  • Evaluate model performance
  • Predict molecular properties

Inputs

  • SMILES strings
  • SDF files
  • Protein sequences
  • Molecular images
  • JSON datasets
  • Molecular property labels
  • Model configuration
  • Benchmark dataset selection

Outputs

  • Processed datasets
  • Molecular features
  • Trained models
  • Property predictions
  • Evaluation metrics
  • Dataset splits

Requirements

  • Python environment
  • DeepChem library

Source

  • Spec: SKILL.md

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molecular machine learning
cheminformatics
drug discovery
property prediction
graph neural networks
MoleculeNet
Load molecular datasets
Featurize molecular structures
Split molecular datasets
Train predictive models
SMILES strings
SDF files
Protein sequences
Processed datasets
Molecular features
Trained models