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hypogenic - Generate and test hypotheses from tabular data

Generates and tests hypotheses from observational tabular datasets, optionally integrating research literature through HypoGeniC, HypoRefine, and Union methods.

Tags

Updated: 2026-10-16

Capabilities

Typical Inputs

Typical Outputs

What this skill does

  • Generate data-driven hypotheses
  • Refine hypotheses iteratively
  • Test competing hypotheses
  • Integrate research literature
  • Process research PDFs
  • Run hypothesis inference
  • Cache LLM responses
  • Process datasets in parallel

Inputs

  • Tabular datasets
  • Task configuration YAML
  • Prompt templates
  • Research paper PDFs
  • Hypothesis bank files
  • Test dataset paths

Outputs

  • Generated hypothesis files
  • Hypothesis inference results
  • Processed literature files
  • Validation performance

Requirements

  • Hypogenic package
  • HuggingFace-format datasets
  • API-based or local LLM
  • Configured task prompts
  • GROBID for PDF preprocessing
  • s2orc-doc2json for literature processing
  • Redis server for caching

Source

  • Spec: SKILL.md

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hypothesis generation
hypothesis testing
tabular data
literature integration
scientific discovery
large language models
Generate data-driven hypotheses
Refine hypotheses iteratively
Test competing hypotheses
Integrate research literature
Tabular datasets
Task configuration YAML
Prompt templates
Generated hypothesis files
Hypothesis inference results
Processed literature files