mass-spectrometry-target-list-preparation - Prepare TARDIS-compatible target lists for LC-MS analysis.
Loads compound spreadsheets, filters by ionization polarity, and extracts target metadata into standardized data frames for LC-MS analysis.
Tags
Updated: 2026-09-17Capabilities
Typical Inputs
What this skill does
- Load tabular compound files
- Filter targets by ionization polarity
- Extract compound metadata columns
- Create standardized target list objects
Inputs
- Raw XLSX or CSV compound spreadsheet
- Compound metadata with m/z and retention time
- Ionization polarity column indicators
Outputs
- Standardized target list data.frame
- TARDIS-compatible single-polarity target object
Requirements
- R environment
- TARDIS package
- Retention times specified in minutes
