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molfeat - Molecular featurization for machine learning

Converts SMILES strings or RDKit molecules into numerical features for QSAR, screening, similarity search, and molecular machine learning.

Tags

Updated: 2026-09-29

Capabilities

Typical Inputs

Typical Outputs

What this skill does

  • Convert molecular structures to features
  • Compute molecular fingerprints
  • Calculate molecular descriptors
  • Generate pretrained embeddings
  • Process batches in parallel
  • Save and reload configurations
  • Search available featurizers

Inputs

  • SMILES strings
  • RDKit molecules
  • Molecular datasets
  • Featurizer configurations
  • Pretrained model names

Outputs

  • Numerical feature vectors
  • Molecular embeddings
  • Featurizer configuration files
  • Featurizer search results

Requirements

  • Python environment
  • molfeat package
  • Optional featurizer dependencies

Source

  • Spec: SKILL.md
molecular featurization
cheminformatics
machine learning
QSAR
molecular fingerprints
molecular embeddings
Convert molecular structures to features
Compute molecular fingerprints
Calculate molecular descriptors
Generate pretrained embeddings
SMILES strings
RDKit molecules
Molecular datasets
Numerical feature vectors
Molecular embeddings
Featurizer configuration files