prs-net-deep-learning-agent - Geometric Deep Learning PRS Prediction
Geometric deep learning for polygenic risk score prediction with gene interaction modeling
Tags
Updated: 2026-03-24Capabilities
Typical Inputs
Typical Outputs
What this skill does
- predict disease risk
- model gene interactions
- integrate PPI networks
- identify pathways
- transfer across ancestries
- quantify uncertainty
- calculate risk scores
- explain predictions
Inputs
- genotypes
- PPI network
- gene mapping
- training labels
- GWAS summary
Outputs
- PRS-Net scores
- risk percentiles
- gene importance
- pathway enrichment
- module visualizations
- prediction uncertainty
Requirements
- Python 3.10+
- PyTorch
- PyTorch Geometric
- NetworkX
- GPU