string-database - Query STRING protein interaction data
Query STRING protein interaction networks, discover interaction partners, analyze enrichment, and retrieve homology data through its REST API.
Tags
Updated: 2026-10-04Capabilities
Typical Inputs
Typical Outputs
What this skill does
- Map protein identifiers
- Retrieve interaction networks
- Generate network images
- Find interaction partners
- Analyze functional enrichment
- Test PPI enrichment
- Retrieve homology scores
- Retrieve database version
Inputs
- Protein names
- Gene names
- External protein IDs
- NCBI taxon IDs
- Confidence thresholds
- Network type
- Network visualization flavor
- Partner limits
Outputs
- Interaction network tables
- Network PNG images
- Interaction partner results
- Functional enrichment results
- PPI enrichment statistics
- Homology information
- STRING version information
Requirements
- Python environment
- STRING REST API access