bio-phylo-tree-io - Phylogenetic Tree File I/O
Read, write, and convert phylogenetic tree files in Newick, Nexus, PhyloXML, and NeXML formats using Biopython Bio.Phylo
Tags
Updated: 2026-03-20Capabilities
Typical Inputs
Typical Outputs
What this skill does
- read tree files
- write tree files
- convert tree formats
- parse Newick format
- parse Nexus format
- parse PhyloXML format
- parse NeXML format
- serialize tree to string
Inputs
- phylogenetic tree files
- Newick strings
Outputs
- tree objects
- converted tree files
- serialized tree strings
Requirements
- Python
- Biopython