bio-read-qc-quality-reports - FASTQ Quality Analysis with FastQC and MultiQC
Generate and interpret quality reports from FASTQ files using FastQC and MultiQC
Tags
Updated: 2026-02-11Capabilities
Typical Inputs
Typical Outputs
What this skill does
- run FastQC analysis
- generate MultiQC reports
- extract quality metrics
- process batch samples
- interpret quality scores
Inputs
- FASTQ files
- FastQC configuration
- MultiQC configuration
Outputs
- HTML quality reports
- ZIP data archives
- summary statistics files
Requirements
- fastqc tool
- multiqc tool
- CLI environment