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OpenClaw Skills & Use Case Index

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Skills with input: Aligned BAM files

Browse skills that use this input.

  • bio-gatk-variant-calling - Call germline variants with GATK
    bioinformaticsvariant callingGATKHaplotypeCaller

    ★ 4 · Updated 2026-10-07

    Calls germline SNPs and indels with HaplotypeCaller and GVCF workflows, while covering caller selection, error modeling, and edge cases.

    ⚙ Call germline variants⚙ Generate per-sample GVCFs⚙ Joint-genotype GVCFs