Skills tagged: quality control

• flow-cytometry-cytometry-qc - Cytometry Quality Control and Cleaning

  quality controlflow cytometrymass cytometrydata cleaning

  ★ 97 · Updated 2026-06-30

  Quality control for flow, spectral, and mass cytometry including anomaly detection and data cleaning

  ⚙ detect flow-rate anomalies⚙ detect signal anomalies⚙ detect dynamic range anomalies
• multiqc-qc-reports - Multi-Sample QC Report Aggregator

  bioinformaticsquality controlreportingNGS

  ★ 1 · Updated 2026-06-30

  Aggregates QC outputs from 150+ bioinformatics tools into a single interactive HTML report

  ⚙ scan directories⚙ parse tool logs⚙ generate HTML report
• bio-single-cell-preprocessing - Single-Cell RNA-seq Preprocessing

  single-cell RNA-seqquality controldata filteringnormalization

  ★ 1,207 · Updated 2026-06-15

  Quality control, filtering, and normalization for single-cell RNA-seq using Seurat and Scanpy

  ⚙ calculate QC metrics⚙ filter cells⚙ filter genes
• bio-chipseq-qc - ChIP-seq Quality Control

  bioinformaticsChIP-seqquality controlgenomics

  ★ 602 · Updated 2026-05-28

  Calculate FRiP, NSC/RSC, library complexity, and IDR metrics for ChIP-seq quality assessment

  ⚙ calculate FRiP⚙ calculate NSC⚙ calculate RSC
• recognize-stopping-point - Analyze session to identify natural stopping points

  session managementstopping pointquality controlcircadian awareness

  ★ 0 · Updated 2026-05-09

  Analyze session context to determine natural stopping points based on milestones, quality, timing, and duration.

  ⚙ analyze session context⚙ evaluate stopping point⚙ recognize natural milestone
• image-validator - Validate illustrations against brand style guide

  image validationstyle guidebrand compliancequality control

  ★ 18 · Updated 2026-03-26

  Validate images against illustration style guide

  ⚙ validate image⚙ check mode fit⚙ validate color palette
• sc-qc - Single-cell QC metrics calculation and visualization

  singlecellquality controlQC metricsvisualization

  ★ 161 · Updated 2026-03-26

  Calculate QC metrics and generate diagnostic plots for single-cell RNA-seq data

  ⚙ calculate QC metrics⚙ load AnnData object⚙ generate violin plots
• genomeark-aws - Access GenomeArk AWS S3 for VGP Data

  genomicsAWS S3VGPdata repository

  ★ 20 · Updated 2026-03-24

  Access and navigate GenomeArk AWS S3 bucket containing VGP assemblies and quality control data

  ⚙ read genome assemblies⚙ read QC metrics⚙ read meryl histograms
• methodical-dev - Structured Development Methodology Guide

  developmentmethodologygitstep-by-step

  ★ 12 · Updated 2026-03-23

  Guides users through structured development methodology with step-by-step validation and controlled AI assistance

  ⚙ ask user questions⚙ check git status⚙ create implementation plan
• quality-control-provisions - Drafts Trademark License QC Provisions

  trademark licensingquality controllegal draftingcompliance

  ★ 41 · Updated 2026-03-22

  Drafts quality control exhibit for trademark license agreements

  ⚙ draft quality control exhibit⚙ establish quality standards⚙ specify monitoring procedures
• bio-longread-qc - Long-read sequencing data quality control

  bioinformaticslong-read sequencingquality controlONT

  ★ 0 · Updated 2026-03-21

  Perform quality control on long-read sequencing data using NanoPlot, NanoStat, and chopper

  ⚙ read FASTQ files⚙ read BAM files⚙ read sequencing summary
• bio-longread-qc - Long-read sequencing quality control tool

  long-read sequencingquality controlnanoporepacbio

  ★ 2 · Updated 2026-03-21

  Quality control for long-read sequencing data using NanoPlot, NanoStat, and chopper

  ⚙ generate read length distributions⚙ create quality score plots⚙ calculate summary statistics
• bio-longread-qc - Long-read sequencing quality control

  long-read sequencingquality controlNanoporePacBio

  ★ 0 · Updated 2026-03-21

  Generate QC reports, filter reads by length and quality, and visualize read characteristics for long-read sequencing data

  ⚙ generate QC reports⚙ filter reads by length⚙ filter reads by quality
• bio-longread-qc - Long-Read Sequencing Quality Control

  bioinformaticslong-read sequencingquality controlONT

  ★ 12 · Updated 2026-03-21

  Quality control for long-read sequencing data using NanoPlot, NanoStat, and chopper

  ⚙ generate QC reports⚙ filter reads by quality⚙ filter reads by length
• academic-delivery - 8-Step Academic Delivery Pipeline

  academic writingessay generationreport creationquality control

  ★ 591 · Updated 2026-03-11

  8-step pipeline for academic deliverables with automatic adversarial review

  ⚙ Parse assignment brief⚙ Classify deliverable type⚙ Load domain context
• curating-memories - Memory Curation for Knowledge Base Quality

  memory managementknowledge curationquality controldata maintenance

  ★ 300 · Updated 2026-02-23

  Maintain memory quality through updating, marking obsolete, and linking related knowledge

  ⚙ update memory content⚙ mark memories obsolete⚙ link related memories
• auditing-specs - Specification Auditing and TDD Readiness Verification

  auditspecificationquality controlintegration

  ★ 0 · Updated 2026-02-18

  Audits implemented specifications against SSOT and verifies TDD readiness for implementation phase

  ⚙ Check integration status and coverage⚙ Execute SSOT integrity audit⚙ Verify TDD readiness
• mr-review - Detailed Merge Request Code Review Tool

  code reviewGit operationssoftware developmentquality control

  ★ 1 · Updated 2026-02-13

  Compare current branch with base branch to perform detailed code review

  ⚙ identify current branch⚙ compare branch differences⚙ inspect file contents
• book-factory - Automated Game Book Artifact Generation and Validation

  game developmentautomationartifact managementquality control

  ★ 64 · Updated 2026-02-13

  Generate and validate high-volume game book artifacts with repeatable packaging and integrity checks

  ⚙ generate game book artifacts⚙ validate artifact integrity⚙ manage generation throughput
• output-validation - Local Self-Check for Instructions and Mask Outputs

  validationquality controldata integrityautomated testing

  ★ 1,808 · Updated 2026-02-12

  Validates format, range, and consistency of generated instructions and masks without ground truth

  ⚙ check key format⚙ verify frame coverage⚙ count frames

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