biopython-v2 - Process biological data with Biopython
Provides Python tools for biological sequences, file formats, NCBI databases, BLAST, alignments, protein structures, and phylogenetics.
Tags
Updated: 2026-10-12Capabilities
Typical Inputs
Typical Outputs
What this skill does
- Manipulate biological sequences
- Read and write bioinformatics formats
- Access NCBI databases programmatically
- Run and parse BLAST searches
- Perform sequence alignments
- Analyze protein structures
- Manipulate phylogenetic trees
Inputs
- Task description
- Biological sequence data
- Bioinformatics files
- Biopython reference files
- Entrez email address
Outputs
- Adapted Biopython code
- Processed biological data
- Parsed analysis results
Requirements
- Python 3
- NumPy
- Biopython
- Entrez email for NCBI access