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Skills tagged: sequence analysis

Browse skills that share this tag.

  • bioservices - Bioinformatics database access
    bioinformaticsdatabasesequence analysisidentifier mapping

    ★ 5 · Updated 2026-06-15

    Python package providing programmatic access to 40+ bioinformatics web services and databases.

    ⚙ retrieve protein sequences⚙ search protein entries⚙ map identifiers
  • pysam - Genomic File Toolkit
    bioinformaticsgenomicsNGSalignment

    ★ 2 · Updated 2026-06-15

    Read/write SAM/BAM/CRAM alignments, VCF/BCF variants, FASTA/FASTQ sequences for NGS data

    ⚙ Open alignment files⚙ Open variant files⚙ Open sequence files
  • pysam - Genomic file toolkit for NGS data
    bioinformaticsgenomicsNGSsequence analysis

    ★ 64 · Updated 2026-06-15

    Read and write genomic files including SAM/BAM/CRAM alignments, VCF/BCF variants, and FASTA/FASTQ sequences

    ⚙ read alignment files⚙ read variant files⚙ read sequence files
  • bio-motif-search - Biological Sequence Motif Search
    bioinformaticssequence analysismotif searchDNA

    ★ 1,207 · Updated 2026-06-15

    Find patterns, motifs, and subsequences in biological sequences using Biopython

    ⚙ find sequence patterns⚙ count pattern occurrences⚙ search with regex
  • bio-chip-seq-motif-analysis - ChIP-seq/ATAC-seq Motif Analysis
    bioinformaticsChIP-seqATAC-seqmotif analysis

    ★ 602 · Updated 2026-05-11

    Identify DNA sequence motifs enriched in genomic peak data using HOMER and MEME

    ⚙ find enriched motifs⚙ compare motifs to database⚙ scan genome for matches
  • blast_protein_analysis - BLAST and Protein Analysis Pipeline for Bioinformatics
    bioinformaticssequence analysisprotein analysisBLAST

    ★ 167 · Updated 2026-03-09

    BLAST search followed by comprehensive protein analysis: structure prediction, properties, and function

    ⚙ run blast search⚙ predict protein structure⚙ calculate protein properties