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Skills tagged: A/B compartments

Browse skills that share this tag.

  • bio-hi-c-analysis-compartment-analysis - Identify A/B compartments from Hi-C data with cooltools
    Hi-CA/B compartmentscooltoolschromatin structure

    Updated 2026-09-19

    Detects A/B chromatin compartments from Hi-C contact matrices using cooltools eigenvector decomposition and quantifies compartmentalization strength.

    ⚙ Compute compartment eigenvectors⚙ Orient compartments using GC content⚙ Extract AB compartment calls