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OpenClaw Skills & Use Case Index

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Skills tagged: spatial transcriptomics

Browse skills that share this tag.

  • scvitools-docs-truly-complete - Complete scvi-tools Documentation Guide
    single-cell analysisdeep learningmodel trainingbioinformatics

    ★ 602 · Updated 2026-06-30

    Comprehensive documentation assistance for scvi-tools deep learning single-cell analysis toolkit

    ⚙ load single-cell data⚙ train SCVI model⚙ setup AnnData
  • simo-multiomics-integration-agent - Multi-omics Spatial Integration
    spatial multi-omicssingle-cell multi-omicsprobabilistic alignmenttissue atlas construction

    ★ 18 · Updated 2026-03-20

    Spatial integration of multi-omics datasets using probabilistic alignment

    ⚙ integrate spatial transcriptomics⚙ project scATAC-seq profiles⚙ map methylation data
  • bio-spatial-transcriptomics-spatial-domains - Spatial Domain Detection in Spatial Transcriptomics
    spatial transcriptomicsclusteringspatial domainsbioinformatics

    ★ 57 · Updated 2026-03-20

    Identify spatial domains and tissue regions using expression and spatial context clustering

    ⚙ Build spatial neighbors graph⚙ Run Leiden clustering⚙ Combine expression graphs
  • bio-spatial-transcriptomics-spatial-domains - Spatial Domain Detection in Spatial Transcriptomics
    spatial transcriptomicsspatial clusteringdomain detectionSquidpy

    ★ 18 · Updated 2026-03-20

    Identify spatial domains and tissue regions in spatial transcriptomics data by clustering spots with expression and spatial context

    ⚙ build spatial neighbors⚙ run Leiden clustering⚙ visualize spatial clusters
  • simo-multiomics-integration-agent - AI Multi-omics Spatial Integration
    multi-omicsspatial transcriptomicssingle-cell genomicsspatial integration

    ★ 602 · Updated 2026-03-20

    Spatial integration of multi-omics datasets using probabilistic alignment

    ⚙ normalize single-cell multi-omics data⚙ learn joint latent representations⚙ compute cell-to-spot assignment probabilities
  • bio-spatial-transcriptomics-spatial-domains - Spatial Domain Detection in Transcriptomics Data
    spatial transcriptomicsclusteringbioinformaticsSquidpy

    ★ 602 · Updated 2026-03-20

    Identify spatial domains and tissue regions using expression and spatial clustering methods

    ⚙ build spatial neighbor graph⚙ run Leiden clustering⚙ combine expression and spatial graphs