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Skills tagged: transcriptomics

Browse skills that share this tag.

  • geo-database - Search and retrieve NCBI GEO genomics data
    NCBI GEOgene expressionfunctional genomicstranscriptomics

    ★ 0 · Updated 2026-10-19

    Search NCBI GEO for gene expression and functional genomics datasets, retrieve metadata and expression data, and download associated files.

    ⚙ Search GEO datasets⚙ Search gene expression profiles⚙ Retrieve GEO metadata
  • factor-design-specification - Specify experimental design formula in DESeq2
    transcriptomicsrnaseqdeseq2differential-expression

    ★ 15 · Updated 2026-09-18

    Defines experimental design formulas in DESeq2 to model biological and technical factors explaining RNA-seq count variation.

    ⚙ Construct design formulas⚙ Encode batch effects⚙ Specify interaction terms