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Skills tagged: metagenomics

Browse skills that share this tag.

  • claw-metagenomics - Shotgun Metagenomics Profiler
    metagenomicsantimicrobial-resistancetaxonomyfunctional-profiling

    ★ 1,141 · Updated 2026-06-15

    Performs taxonomic classification, antimicrobial resistance detection, and functional pathway profiling on shotgun metagenomics data.

    ⚙ read FASTQ files⚙ run Kraken2 classification⚙ run Bracken abundance refinement
  • bio-metagenomics-functional-profiling - Metagenomic Functional Profiling Tool
    HUMAnN3CLIfunctional profilingmetagenomics

    ★ 22 · Updated 2026-03-20

    Profile functional potential of metagenomes using HUMAnN3 to obtain pathway and gene family abundances.

    ⚙ run HUMAnN3⚙ download databases⚙ process samples
  • bio-metagenomics-functional-profiling - Metagenomic Functional Profiling with HUMAnN3
    metagenomicsfunctional profilingHUMAnN3pathway analysis

    ★ 650 · Updated 2026-03-20

    Profile functional potential of metagenomic samples using HUMAnN3 to get pathway and gene family abundances

    ⚙ analyze metagenomic samples⚙ calculate pathway abundances⚙ count gene families