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OpenClaw Skills & Use Case Index

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Skills tagged: Scanpy

Browse skills that share this tag.

  • anndata - Manage AnnData Objects
    single-cell RNA-seqbioinformaticsgenomicsdata processing

    ★ 399 · Updated 2026-06-30

    Manage AnnData objects for single-cell genomics and biological datasets

    ⚙ create AnnData object⚙ read h5ad file⚙ write h5ad file
  • bio-spatial-transcriptomics-spatial-domains - Spatial Domain Detection in Spatial Transcriptomics
    spatial transcriptomicsclusteringspatial domainsbioinformatics

    ★ 60 · Updated 2026-03-20

    Identify spatial domains and tissue regions using expression and spatial context clustering

    ⚙ Build spatial neighbors graph⚙ Run Leiden clustering⚙ Combine expression graphs
  • bio-spatial-transcriptomics-spatial-domains - Spatial Domain Detection in Spatial Transcriptomics
    spatial transcriptomicsspatial clusteringdomain detectionSquidpy

    ★ 18 · Updated 2026-03-20

    Identify spatial domains and tissue regions in spatial transcriptomics data by clustering spots with expression and spatial context

    ⚙ build spatial neighbors⚙ run Leiden clustering⚙ visualize spatial clusters